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Morphological and molecular characterization of Distoseptispora bambusae from Iran | ||
| Mycologia Iranica | ||
| مقاله 1، دوره 10، شماره 2، اسفند 2023، صفحه 1-10 اصل مقاله (1.37 M) | ||
| نوع مقاله: Original Article | ||
| شناسه دیجیتال (DOI): 10.22092/MI.2023.362015.1258 | ||
| نویسندگان | ||
| Abdollah Ahmadpour* 1؛ Youbert Ghosta2؛ Zeinab Heidarian3؛ Zahra Alavi3؛ Fatemeh Alavi3 | ||
| 1Higher Education Center of Shahid Bakeri, Urmia University, Miyandoab, Iran | ||
| 2Department of Plant Protection, Faculty of Agriculture and Natural Resources, Urmia University, Urmia, Iran | ||
| 3Higher Education Center of Shahid Bakeri, Urmia University, Miyandoab, Iran. | ||
| چکیده | ||
| Distoseptispora generally is regarded as a saprobic lignicolous fungal genus and presently comprises 64 species. Of these, 42 of them were found in freshwater and 22 in terrestrial habitats. Most Distoseptispora species are reported from China and Thailand, which are subtropical and tropical regions. In this study, we report Distoseptispora bambusae as a saprobic fungus on decaying leaves of common bamboo (Bambusa vulgaris) based on morphological characteristics and sequence data of the ITS‒rDNA region. Distoseptispora bambusae was described, illustrated, and its morphology and phylogenetic relationships with similar Distoseptispora species were discussed. To the best of our knowledge, this is the first report of D. bambusae on common bamboo for the mycobiota of Iran and the Middle East. | ||
| کلیدواژه‌ها | ||
| Distoseptisporaceae؛ ITS‒rDNA؛ Morphology؛ Phylogeny؛ Taxonomy | ||
| مراجع | ||
|
Afshari, N., Gomes de Farias, A.R., Bhunjun, C.S., Phukhamsakda, C., Lumyong, S. and Hyde, K.D. 2023. Distoseptispora dipterocarpi sp. nov. (Distoseptisporaceae), a lignicolous fungus on decaying wood of Dipterocarpus in Thailand. Current Research in Environmental & Applied Mycology 13: 68–78.
Ahmadpour, A., Ghosta, Y. and Poursafar, A. 2021. Novel species of Alternaria section Nimbya from Iran as revealed by morphological and molecular data. Mycologia 113: 1073–1088.
Ahmadpour, A., Heidarian, Z., Alavi, Z., Alavi, F. and Ghosta, Y. 2023. Exserohilum persianum sp. nov., a new species from Iran based on morphological and molecular characters. Mycologia Iranica 10: 35–44.
Crous, P.W., Wingfield, M.J., Lombard, L., Roets, F., Swart, W.J., et al. 2019. Fungal Planet description sheets: 951–1041. Persoonia 43: 223–425.
Dong, W., Hyde, K.D., Jeewon, R., Doilom, M., Yu, X.D., et al. 2021. Towards a natural classification of annulatascaceae-like taxa II: Introducing five new genera and eighteen new species from freshwater. Mycosphere 12: 1–88.
Ershad, D. 2022. Fungi and fungal analogues of Iran. Ministry of Agriculture, Agricultural Research, Education and Extension Organization, Iranian Research Institute of Plant Protection, Iran. 695 pp.
Farr, D.F. and Rossman, A.Y. 2023. Fungal databases, U.S. National Fungus Collections, ARS, USDA. https://nt.ars-grin.gov/fungaldatabases/. Retrieved January 25, 2023.
Hyde, K.D., Bao, D.F., Hongsanan, S., Chethana, K.W.T., Yang, J. and Suwannarach, N. 2021. Evolution of freshwater Diaporthomycetidae (Sordariomycetes) provides evidence for five new orders and six new families. Fungal Diversity 107: 71–105.
Hyde, K.D., Hongsanan, S., Jeewon, R., Bhat, D.J., McKenzie, E.H.C., et al.. 2016. Fungal diversity notes 367–490: Taxonomic and phylogenetic contributions to fungal taxa. Fungal Diversity 80: 1–270.
Hyde, K.D., Norphanphoun, C., Maharachchikumbura, S.S.N., Bhat, D.J., Jones, E.B.G., et al. 2020. Refined families of Sordariomycetes. Mycosphere 11: 305–1059.
Hyde, K.D., Tennakoon, D.S., Jeewon, R., Bhat, D.J., Maharachchikumbura, S.S., et al. 2019. Fungal diversity notes 1036–1150: Taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Diversity 96: 1–242.
Jayawardena, R.S., Hyde, K.D., Wang, S., Sun, Y.R., Suwannarach, N., et al. 2023. Fungal diversity notes 1512–1610: Taxonomic and phylogenetic contributions on genera and species of fungal taxa. Fungal Diversity 23: 1–272.
Katoh, K., Rozewicki, J. and Yamada, K.D. 2019. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings in Bioinformatics 108: 1–7.
Konta, S., Tibpromma, S., Karunarathna, S.C., Samarakoon, M.C., Steven, L.S., et al. 2023. Morphology and multigene phylogeny reveal ten novel taxa in Ascomycota from terrestrial palm substrates (Arecaceae) in Thailand. Mycosphere 14: 107–152.
Korbie, D.J. and Mattick, J.S. 2008. Touchdown PCR for increased specificity and sensitivity in PCR amplification. Nature Protocols 9: 1452–1456.
Krauss, G.J., Sole, M., Krauss, G., Schlosser, D., Wesenberg, D. and Baerlocher, F. 2011. Fungi in freshwaters: Ecology, physiology and biochemical potential. FEMS Microbiology Reviews 35: 620−651.
Li, W.L., Liu, Z.P., Zhang, T., Dissanayake, A.J., Luo, Z.L. et al. 2021.Additions to Distoseptispora (Distoseptisporaceae) associated with submerged decaying wood in China. Phytotaxa 520: 75–86.
Liu, J., Hu, Y., Luo, X., Xu, Z., Castañeda-Ruíz, R.F. et al. 2023. Morphological and phylogenetic analyses reveal three new species of Distoseptispora (Distoseptisporaceae, Distoseptisporales) from Yunnan, China. Journal of Fungi 9: 470.
Luo, Z.L., Hyde, K.D., Liu, J.K., Bhat, D.J., Bao, D.F. et al. 2018. Lignicolous freshwater fungi from China II: Novel Distoseptispora (Distoseptisporaceae) species from northwestern Yunnan Province and a suggested unified method for studying lignicolous freshwater fungi. Mycosphere 9: 444–461.
Luo, Z.L., Hyde, K.D., Liu, J.K., Maharachchikumbura, S.S.N., Jeewon, R. et al. 2019. Freshwater Sordariomycetes. Fungal Diversity 99: 451–660.
Ma, J., Zhang, J.Y., Xiao, X.J., Xiao, Y.P., Tang, X. et al. 2022. Multi-gene phylogenetic analyses revealed five new species and two new records of Distoseptisporales from China. Journal of Fungi 8: 1202.
Maddison, W.P. and Maddison, D.R. 2019. Mesquite: a modular system for evolutionary analysis. Version 3.61. Available from: http://www.mesquiteproject.org.
McKenzie, E.H.C. 1995. Dematiaceous hyphomycetes on Pandanaceae. 5. Sporidesmium sensu lato. Mycotaxon 56: 9–29.
Miller, M.A., Pfeiffer, W. and Schwartz T. 2012. The CIPRES science gateway: enabling high-impact science for phylogenetics researchers with limited resources. Paper presented at: Proceedings of the 1st Conference of the Extreme Science and Engineering Discovery Environment: Bridging from the extreme to the campus and beyond (ACM).
Monkai, J., Boonmee, S., Ren, G.C., Wei, D.P., Phookamsak, R. and Mortimer, P.E. 2020. Distoseptispora hydei sp. nov. (Distoseptisporaceae), a novel lignicolous fungus on decaying bamboo in Thailand. Phytotaxa 459: 93–107.
Nylander, J.A.A. 2004. MrModeltest v2.0. Program distributed by the author. Evolutionary Biology Centre, Uppsala University, Uppsala, Sweden.
Phukhamsakda, C., Mckenzie, E.H.C., Phillips, A.J.L., Jones, E.B.G., Bhat, D.J. et al. 2020. Microfungi associated with Clematis (Ranunculaceae) with an integrated approach to delimiting species boundaries. Fungal Diversity 102: 1–203.
Phukhamsakda, C., Nilsson, R.H., Bhunjun, C.S., de Farias, A.R,, Sun, Y.R. et al. 2022. The numbers of fungi: contributions from traditional taxonomic studies and challenges of metabarcoding. Fungal Diversity 114: 327–386.
Rambaut, A. 2019. FigTree, a graphical viewer of phylogenetic trees. Available from: http://tree.bio.ed.ac.uk/software/figtree.
Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A. et al. 2012. MrBayes 3: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539–542.
Shen, H.W., Bao, D.F., Hyde, K.D., Su, H.Y., Bhat, D.J. and Luo, Z.L. 2021. Two novel species and two new records of Distoseptispora from freshwater habitats in China and Thailand. MycoKeys 84: 79.
Shoemaker, R.A. and White, G.P. 1985. Lasiosphaeria caesariata with Sporidesmium hormiscioides and L. triseptata with S. adscendens. Sydowia 38: 278–283.
Song, H.Y., Sheikha, A.F., Zhai, Z.J., Zhou, J.P., Chen, M.H. et al. 2020 Distoseptispora longispora sp. nov. from freshwater habitats in China. Mycotaxon 1353: 513–523.
Stamatakis, A. 2014. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312–1313.
Su, H.Y., Hyde, K.D., Maharachchikumbura, S.S.N., Ariyawansa, H.A., Luo, Z.L. et al. 2016. The families Distoseptisporaceae fam. nov., Kirschsteiniotheliaceae, Sporormiaceae and Torulaceae, with new species from freshwater in Yunnan Province, China. Fungal Diversity 80: 375–409.
Sun, Y.R., Goonasekara, I.D., Thambugala, K.M., Jayawardena, R.S., Wang, Y. et al. 2020. Distoseptispora bambusae sp. nov. (Distoseptisporaceae) on bamboo from China and Thailand. Biodiversity Data Journal 8: e53678.
Tamura, K., Stecher, G., Peterson, D., Filipski, A. and Kumar, S. 2013. MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular Biology and Evolution 30: 2725–2729.
Tibpromma, S., Hyde, K.D., McKenzie, E.H.C., Bhat, D.J., Phillips, A.J.L. et al. 2018. Fungal diversity notes 840–928: Micro-fungi associated with Pandanaceae. Fungal Diversity 93: 1–160.
White, T.J., Bruns, T., Lee, S.J.W.T. and Taylor, J.W. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR protocols: a guide to methods and applications (M.A. Innis, D.H. Gelfand, J.J, Sninsky & T.J. White, eds): 315–322. Academic Press, New York.
Wong, K.M.K., Goh, T.K., Hodgkiss, I.J., Hyde, K.D., Ranghoo, V.M. et al. 1998. Role of fungi in freshwater ecosystems. Biodiversity and Conservation 7: 1187–1206.
Xia, J.W., Ma, Y.R., Li, Z. and Zhang, X.G. 2017. Acrodictys-like wood decay fungi from southern China, with two new families Acrodictyaceae and Junewangiaceae. Scientific Reports 7: e7888.
Yang, J., Liu, L.L., Jones, E.B.G., Li, W.L., Hyde, K.D, and Liu, Z.Y. 2021. Morphological variety in Distoseptispora and introduction of six novel species. Journal of Fungi 7: 945.
Yang, J., Maharachchikumbura, S.S., Liu, J.K., Hyde, K,D., Gareth Jones, E.B. et al. 2018. Pseudostanjehughesia aquitropica gen. et sp. nov. and Sporidesmium sensu lato species from freshwater habitats. Mycological Progress 17: 591–616.
Zhai, Z.J., Yan, J.Q., Li, W.W., Gao, Y., Hu, H.J. et al. 2022. Three novel species of Distoseptispora (Distoseptisporaceae) isolated from bamboo in Jiangxi Province, China. MycoKeys 88: 35–54.
Zhang, H., Zhu, R., Qing, Y., Yang, H., Li, C. et al. 2022. Polyphasic identification of Distoseptispora with six new species from fresh water. Journal of Fungi 8: 1063. | ||
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